BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A12SP1|AL425630
(165 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1613 316 7e-87
>3x_Contig1613
Length = 13977
Score = 316 bits (157), Expect = 7e-87
Identities = 161/165 (97%)
Strand = Plus / Minus
Query: 1 ccaaamaagcggtataattatcatcggtgccactaacttcccagaatcattggataaggc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 ccaaacaagcggtataattatcatcggtgccactaacttcccagaatcattggataaggc 2184
Query: 61 tttgacaagaccaggtagattcgataaggtcgtyaatgttgamttacctkatgttcgcgg 120
||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct: 2183 tttgacaagaccaggtagattcgataaggtcgtcaatgttgacttacctgatgttcgcgg 2124
Query: 121 gcgtgctgacattttgagacatcatatgaagaaggttactgttgc 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 gcgtgctgacattttgagacatcatatgaagaaggttactgttgc 2079
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 846
Number of Sequences: 1807
Number of extensions: 846
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 165
length of database: 10,358,551
effective HSP length: 15
effective length of query: 150
effective length of database: 10,331,446
effective search space: 1549716900
effective search space used: 1549716900
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 48 (97.2 bits)